Laboratory for Genomics and Bioinformatics

  
 

Lee H. Pratt
Marie-Michèle Cordonnier-Pratt
  
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Equus
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Ichthyophthirius
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Library Brief description Long description Library construction Combined genotype code Number of genotypes in library Genus Species Breed or line Genotype name Genus common name Species common name Individual ID Individual name Comments regarding species Comments regarding breed or line genus_code sp_code gt_gen_code gt_code
COLD1 Root cold description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
COLD1 Root cold description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
COLD1 Root cold description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
FLD1 Root flooded description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
FLD1 Root flooded description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
FLD1 Root flooded description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
GEO1 Root gravity description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
GEO1 Root gravity description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
GEO1 Root gravity description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
GEO2 Root gravity description comments A032 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
GEO2 Root gravity description comments A032 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
HEAT1 Root at 37 C for 24 hr description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
HEAT1 Root at 37 C for 24 hr description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
HEAT1 Root at 37 C for 24 hr description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
NDL1 Needles control description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
NDL1 Needles control description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
NDL1 Needles control description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
NDL2 Needles control 2 description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
NDL2 Needles control 2 description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
NDL2 Needles control 2 description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
NXCI Juvenile compression wood - Sederoff project A016 2 Pinus Pinus taeda Coastal plain loblolly pine from North Carolina Coastal plain loblolly pine from North Carolina_2 Loblloly pine loblolly pine Tree 2 6-year-old comments 3 4 18 49
NXCI Juvenile compression wood - Sederoff project A016 3 Pinus Pinus taeda Coastal plain loblolly pine from North Carolina Coastal plain loblolly pine from North Carolina_3 Loblloly pine loblolly pine Tree 3 6-year-old comments 3 4 18 50
NXCI Juvenile compression wood - Sederoff project A016 1 Pinus Pinus taeda Coastal plain loblolly pine from North Carolina Coastal plain loblolly pine from North Carolina_1 Loblloly pine loblolly pine Tree 1 6-year-old comments 3 4 18 18
NXLV Transitional/mature late wood - Sederoff project A017 1 Pinus Pinus taeda Coastal plain loblolly pine from North Carolina Coastal plain loblolly pine from North Carolina_7 Loblloly pine loblolly pine unknown 20-year-old comments 3 4 18 54
NXNV Mature normal wood - Sederoff project A018 1 Pinus Pinus taeda Coastal plain loblolly pine from North Carolina Coastal plain loblolly pine from North Carolina_5 Loblloly pine loblolly pine unknown 35-year-old comments 3 4 18 52
NXPV Transitional planings wood - Sederoff project A019 1 Pinus Pinus taeda Coastal plain loblolly pine from North Carolina Coastal plain loblolly pine from North Carolina_4 Loblloly pine loblolly pine unknown 10-year-old comments 3 4 18 51
NXRV Root wood - Sederoff project A020 1 Pinus Pinus taeda Coastal plain loblolly pine from North Carolina Coastal plain loblolly pine from North Carolina_6 Loblloly pine loblolly pine unknown 12-year-old comments 3 4 18 53
NXSI Juvenile side wood - Sederoff project A016 1 Pinus Pinus taeda Coastal plain loblolly pine from North Carolina Coastal plain loblolly pine from North Carolina_1 Loblloly pine loblolly pine Tree 1 6-year-old comments 3 4 18 18
NXSI Juvenile side wood - Sederoff project A016 2 Pinus Pinus taeda Coastal plain loblolly pine from North Carolina Coastal plain loblolly pine from North Carolina_2 Loblloly pine loblolly pine Tree 2 6-year-old comments 3 4 18 49
NXSI Juvenile side wood - Sederoff project A016 3 Pinus Pinus taeda Coastal plain loblolly pine from North Carolina Coastal plain loblolly pine from North Carolina_3 Loblloly pine loblolly pine Tree 3 6-year-old comments 3 4 18 50
RTAL1 Roots plus added aluminum description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTAL1 Roots plus added aluminum description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
RTAL1 Roots plus added aluminum description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTBOR1 Roots plus added boron description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTBOR1 Roots plus added boron description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
RTBOR1 Roots plus added boron description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTCA1 Roots minus calcium description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
RTCA1 Roots minus calcium description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTCA1 Roots minus calcium description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTCNT1 Root control description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTCNT1 Root control description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTCNT1 Root control description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
RTCNT2 Root control 2 (late) description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTCNT2 Root control 2 (late) description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
RTCNT2 Root control 2 (late) description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTCU1 Roots plus added copper description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTCU1 Roots plus added copper description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
RTCU1 Roots plus added copper description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTDK1 Roots dark description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTDK1 Roots dark description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
RTDK1 Roots dark description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTDR1 Loblolly pine roots recovering from drought DR1 description comments A015 1 Pinus Pinus taeda CCLONES CCLONES 41201 Loblloly pine loblolly pine comments 3 4 48 8
RTDR2 Loblolly pine roots recovering from drought DR2 description comments A021 1 Pinus Pinus taeda CCLONES CCLONES 41369 Loblloly pine loblolly pine comments 3 4 48 10
RTDR3 Loblolly pine roots recovering from drought DR3 description comments A022 1 Pinus Pinus taeda CCLONES CCLONES 43693 Loblloly pine loblolly pine comments 3 4 48 14
RTDS1 Drought-stressed loblolly pine roots DS1 description comments A015 1 Pinus Pinus taeda CCLONES CCLONES 41201 Loblloly pine loblolly pine comments 3 4 48 8
RTDS2 Drought-stressed loblolly pine roots DS2 description comments A021 1 Pinus Pinus taeda CCLONES CCLONES 41369 Loblloly pine loblolly pine comments 3 4 48 10
RTDS3 Drought-stressed loblolly pine roots DS3 description comments A022 1 Pinus Pinus taeda CCLONES CCLONES 43693 Loblloly pine loblolly pine comments 3 4 48 14
RTFE1 Roots minus iron description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTFE1 Roots minus iron description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
RTFE1 Roots minus iron description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTFEPL1 Roots plus added iron description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTFEPL1 Roots plus added iron description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
RTFEPL1 Roots plus added iron description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTHG1 Roots plus added mercury description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTHG1 Roots plus added mercury description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
RTHG1 Roots plus added mercury description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTK1 Roots minus potassium description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTK1 Roots minus potassium description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTK1 Roots minus potassium description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
RTMG1 Roots minus magnesium description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTMG1 Roots minus magnesium description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
RTMG1 Roots minus magnesium description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTMNUT1 Roots minus micronutrients description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
RTMNUT1 Roots minus micronutrients description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTMNUT1 Roots minus micronutrients description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTNACL1 Roots plus added NaCl description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
RTNACL1 Roots plus added NaCl description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTNACL1 Roots plus added NaCl description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTNIT1 Roots minus nitrogen description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTNIT1 Roots minus nitrogen description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTNIT1 Roots minus nitrogen description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
RTPHOS1 Roots minus phosphorous description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTPHOS1 Roots minus phosphorous description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTPHOS1 Roots minus phosphorous description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
RTPQ1 Roots treated with paraquat description comments A032 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTPQ1 Roots treated with paraquat description comments A032 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTS1 Roots minus sulfur description comments A029 2 Pinus Pinus taeda CCLONES CCLONES 41586 Loblloly pine loblolly pine comments 3 4 48 62
RTS1 Roots minus sulfur description comments A029 1 Pinus Pinus taeda CCLONES CCLONES 40430 Loblloly pine loblolly pine comments 3 4 48 61
RTS1 Roots minus sulfur description comments A029 3 Pinus Pinus taeda CCLONES CCLONES 43608 Loblloly pine loblolly pine comments 3 4 48 63
RTWW1 Well-watered loblolly pine roots WW1 description comments A015 1 Pinus Pinus taeda CCLONES CCLONES 41201 Loblloly pine loblolly pine comments 3 4 48 8
RTWW2 Well-watered loblolly pine roots WW2 description comments A021 1 Pinus Pinus taeda CCLONES CCLONES 41369 Loblloly pine loblolly pine comments 3 4 48 10
RTWW3 Well-watered loblolly pine roots WW3 description comments A022 1 Pinus Pinus taeda CCLONES CCLONES 43693 Loblloly pine loblolly pine comments 3 4 48 14
STRR1 Stem Response Resistant description comments A033 3 Pinus Pinus taeda CCLONES CCLONES 40424 Loblloly pine loblolly pine comments 3 4 48 81
STRR1 Stem Response Resistant description comments A033 1 Pinus Pinus taeda CCLONES CCLONES 40071 Loblloly pine loblolly pine comments 3 4 48 79
STRR1 Stem Response Resistant description comments A033 2 Pinus Pinus taeda CCLONES CCLONES 40092 Loblloly pine loblolly pine comments 3 4 48 80
STRS1 Shoot tip pitch canker susceptible description comments A034 2 Pinus Pinus taeda CCLONES CCLONES 40117 Loblloly pine loblolly pine comments 3 4 48 83
STRS1 Shoot tip pitch canker susceptible description comments A034 1 Pinus Pinus taeda CCLONES CCLONES 40036 Loblloly pine loblolly pine comments 3 4 48 82
STRS1 Shoot tip pitch canker susceptible description comments A034 3 Pinus Pinus taeda CCLONES CCLONES 40149 Loblloly pine loblolly pine comments 3 4 48 84